BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G03LP1|AL429791
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig409 1742 0.0
>3x_Contig409
Length = 2404
Score = 1742 bits (878), Expect = 0.0
Identities = 906/915 (99%), Gaps = 1/915 (0%)
Strand = Plus / Plus
Query: 1 gatcatccaacgacacatcccacaaccttgcagtgcaatcagcacccacggtaacaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gatcatccaacgacacatcccacaaccttgcagtgcaatcagcacccacggtaacaactc 545
Query: 61 tagaagactcttcaccatcgtctaaccatgcgacasaanacaaaccaccgccaattggag 120
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 546 tagaagactcttcaccatcgtctaaccatgcgacagcaaacaaaccaccgccaattggag 605
Query: 121 ccttttcagactcaatgtatttgataaattcaccagtcttaccatcaaagcaacatatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ccttttcagactcaatgtatttgataaattcaccagtcttaccatcaaagcaacatatct 665
Query: 181 tacgatcgctaccgacagacacagcatatttccctgcacctggagagaacttgacgtctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tacgatcgctaccgacagacacagcatatttccctgcacctggagagaacttgacgtctc 725
Query: 241 taacgaatttaccttggccgtgatgcgttctatcactgcttgcaaacttgaaaggtggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 taacgaatttaccttggccgtgatgcgttctatcactgcttgcaaacttgaaaggtggac 785
Query: 301 cctggtaaaacacaacagaaccatcatcactgacactgaaagctctcattggtctgcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 cctggtaaaacacaacagaaccatcatcactgacactgaaagctctcattggtctgcttt 845
Query: 361 gcttgaaatgaactgcattgactctttgagagtgacccgagacttcacctaacgagttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gcttgaaatgaactgcattgactctttgagagtgacccgagacttcacctaacgagttgc 905
Query: 421 ccgagtcccaagag-acaaacgcaccaaacctatcacgaccttcaccaacaacagccaat 479
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 ccgagtcccaagagcacaaacgcaccaaacctatcacgaccttcaccaacaacagccaat 965
Query: 480 cttttaccctcaaaatcccaggatatatcagcgacaggaccagcgagcacatgtagttcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 cttttaccctcaaaatcccaggatatatcagcgacaggaccagcgagcacatgtagttcc 1025
Query: 540 gacttaacgttgtactcaatttctccagacttatcgtcctgattccaagaccaaacgata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 gacttaacgttgtactcaatttctccagacttatcgtcctgattccaagaccaaacgata 1085
Query: 600 actctaccggaatcatctcctgaagcaacatattgagacccctggataggagaaaatttt 659
|||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |
Sbjct: 1086 actctaccggaatcatctcctgaagcaatatattgagacccctggatatgagtaaatctc 1145
Query: 660 acaacagtgacattactggtaccatggccattgaattgaacgacatgttcaccatctaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 acaacagtgacattactggtaccatggccattgaattgaacgacatgttcaccatctaaa 1205
Query: 720 gatctaatgatggcagatctaccgctaccataagctaaactgtcagtctttggatcatat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 gatctaatgatggcagatctaccgctaccataagctaaactgtcagtctttggatcatat 1265
Query: 780 gataaatgtgtcgtaaagtttctctttgtagaagggagaggtgcaaaaacctttgctaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 gataaatgtgtcgtaaagtttctctttgtagaagggagaggtgcaaaaacctttgctaaa 1325
Query: 840 ttaatcgaaaccatattatcgcgagatactagatcaattgacttttggaacactctgtaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 ttaatcgaaaccatattatcgcgagatactagatcaattgacttttggaacactctgtaa 1385
Query: 900 acgcaccagaaagac 914
|||||||||||||||
Sbjct: 1386 acgcaccagaaagac 1400
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5465
Number of Sequences: 1807
Number of extensions: 5465
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)